| 2026年11月17日 【Theoretical Biology Seminar】Structure, Bifurcations, and Dynamics: Periodic Oscillations in Reaction Networks |
| 日時: | 2026年11月17日(火)13:30~15:00 |
|---|---|
| 場所: | 医生物学研究所 医生研3号館5階501室 Room 501, 5th floor, Bldg. #3 Institute for Life and Medical Sciences, Kyoto University |
| 演者: | Nicola Vassena Interdisciplinary Center for Bioinformatics, Universität Leipzig, Germany |
| 演題: | Structure, Bifurcations, and Dynamics: Periodic Oscillations in Reaction Networks |
講演要旨
今回は、Universität LeipzigのNicola Vassena博士に、
化学反応系の周期振動に対する構造的アプローチについて、お話しいただきます。
関心のある方の積極的な参加を歓迎いたします。
I will first provide an overview of the concept of parameter-rich
kinetics in reaction networks and its applications. Parameter-rich
kinetics comprise a broad class of kinetic models, including
Michaelis-Menten, Hill, and Generalized Mass Action kinetics, and are
thus particularly well suited to biochemical contexts, such as
metabolic networks. This type of kinetics allows for independent
parametrization of steady-state fluxes and steady-state reactivities.
In this way, “structural conclusions” based solely on
reactant-reaction dependencies are brought to life by guaranteeing the
possibility of their realization at a positive steady state.
Applications include sensitivity and bifurcation analysis. In
particular, in this setting, I will introduce the notion of
oscillatory cores and present structural conditions for periodic
oscillation in reaction networks. This talk is based on joint work
with Peter Stadler and Alex Blokhuis.(Language: English)
20261117_Theoretical Biology Seminar_Nicola Vassena
Host:
contact: Atsushi Mochizuki
Laboratory of Mathematical Biology,
Institute for Life and Medical Sciences,
Kyoto University
Email: mochi[@]infront.kyoto-u.ac.jp
Tel: 075-751-4612
