LiMe 京都大学医生物学研究所

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共同利⽤・共同研究拠点支援成果

☆ 医生物学研究所共同利用機器を利用した研究成果
iSAL共用研究機器を利用した研究成果

☆ Publications supported by Shared Research Facilities at LiMe
★ Publications supported by iSAL

Ikeda, Y., Miyazaki, R., Tsukazaki, T., Akiyama, Y., and Mori, H. (2024)

The translation arrest-cancelation of VemP, a Vibrio secretion monitor, is regulated by multiple cis- and trans-factors, including SecY, the central component of the Sec translocon.

J. Biol. Chem. 300(10) 107735 

doi: 10.1016/j.jbc.2024.107735

Hiharu Inoue,Yoshihiko Tanimoto,Dongming Zheng,Erika Ban‐Furukawa,Miyoko Inoue,Yuko Omori,Yoshihiro Yamaguchi,Taro Tachibana,Hisashi Aso,Weiping Zhang,Eriko Kage‐Nakadai,Yoshikazu Nishikawa,Takayuki Wada

An Atypical Kappa‐Class Chaperone‐Usher Fimbriae of a Human Enterotoxigenic Escherichia coli Strain Shows Multi‐Host Adherence and Distinct Phylogenetic Feature

Microbiology and Immunology

doi: 10.1111/1348-0421.13208

Mina Hashimoto,Yoshihiko Tanimoto,Yen Lin Chen,Takayuki Wada,Eriko Kage-Nakadai

Complete genome sequence of Lactiplantibacillus brownii strain MH-1 isolated from Japanese traditional homemade pickled Chinese cabbage

Microbiology Resource Announcements, 31:377-379

doi: 10.1128/mra.01064-24

Shinsuke Mizuno,Yoshihiko Tanimoto,Ai Mori,Tomoaki Fuseya,Yusuke Ishida,Masahiro Nishiyama,Azusa Maruyama,Masashi Kasai

Acute Encephalopathy Associated with Human Adenovirus Type 14 Infection in 7-Year-Old Girl, Japan

Emerging Infectious Diseases, 31:377-379

doi: 10.3201/eid3102.241168

Mohammad Shaokat Ali,Shamima Ahmed,Yoshihiko Tanimoto,Takayuki Wada,Eriko Kage-Nakadai

Lactococcus lactis subsp. lactis boosts stress resistance and host defense mechanisms in Caenorhabditis elegans

Journal of Applied Microbiology, 136:lxaf016

doi: 10.1093/jambio/lxaf016

Shino Takeuchi,Mohammad Shaokat Ali,Yoshihiko Tanimoto,Eriko Kage-Nakadai

Lactococcus kimchii extends lifespan and alleviates motility decline in Caenorhabditis elegans through ins-20, an insulin-like peptide gene

Bioscience of Microbiota, Food and Health, 43:267-274

doi: 10.12938/bmfh.2023-091

Zou Y, Shikano Y, Nishina Y, Komatsu N, Kage-Nakadai E, Fujiwara M

Size, polyglycerol grafting, and net surface charge of iron oxide nanoparticles determine their interaction and toxicity in Caenorhabditis elegans

Chemosphere. 358:142060

doi: 10.1016/j.chemosphere.2024.142060

Morikawa, K., Nagasaki, A., Sun, L., Kawase, E., Ebihara, T., and Shirayoshi, Y. (2024)

Optogenetic control of early embryo labeling using photoactivatable Cre recombinase 3.0.

FEBS Open Bio. 14, 1888-1898.

doi: 10.1002/2211-5463.13862.

Ohara D, Takeuchi Y, Hirota K.

Type 17 immunity: novel insights into intestinal homeostasis and autoimmune pathogenesis driven by gut-primed T cells.

Cell Mol Immunol. 2024 Nov;21(11):1183-1200.

doi: 10.1038/s41423-024-01218-x

☆★

Nakai R, Yokota T, Tokunaga M, Takaishi M, Yokomizo T, Sudo T, Shi H, Yasumizu Y, Okuzaki D, Kokubu C, Tanaka S, Takaoka K, Yamanishi A, Yoshida J, Watanabe H, Kondoh G, Horie K, Hosen N, Sano S, Takeda J.

A newly identified gene Ahed plays essential roles in murine haematopoiesis.

Nat Commun. 2024 Jun 25;15(1):5090.

doi: 10.1038/s41467-024-49252-7.

Tani-Ichi S, Obwegs D, Yoshikawa A, Watanabe H, Kitano S, Ejima A, Hatano S, Miyachi H, Cui G, Shimba A, Abe S, Hori S, Kondoh G, Sagar, Yoshikai Y, Ikuta K.

A RORE-dependent Intronic Enhancer in the IL-7 Receptor-α Locus Controls Glucose Metabolism via Vγ4+ γδT17 Cells.

J Immunol. 2024 Aug 1;213(3):283-295.

doi: 10.4049/jimmunol.2300450.

Yoshida K, Hada M, Hayashi M, Kizu A, Kitada K, Eguchi-Kasai K, Kokubo T, Teramura T, Hashizume Suzuki H, Watanabe H, Kondoh G, Nagamatsu A, Saganti P, Muratani M, Cucinotta FA, Morita T.

Transcriptome Analysis by RNA Sequencing of Mouse Embryonic Stem Cells Stocked on International Space Station for 1584 Days in Frozen State after Culture on the Ground.

Int J Mol Sci. 2024 Mar 14;25(6):3283.

doi: 10.3390/ijms25063283.

Miyazaki K, Horie K, Watanabe H, Hidaka R, Hayashi R, Hayatsu N, Fujiwara K, Kuwata R, Uehata T, Ochi Y, Takenaka M, Kawaguchi RK, Ikuta K, Takeuchi O, Ogawa S, Hozumi K, Holländer GA, Kondoh G, Akiyama T, Miyazaki M. (2025)

A feedback amplifier circuit with Notch and E2A orchestrates T-cell fate and suppresses the innate lymphoid cell lineages during thymic ontogeny

Genes Dev. ;39(5-6):384-400.

doi: 10.1101/gad.352111.124

Toyama A, Goto Y, Yamauchi Y, Sugiyama H, Kondo Y, Mochizuki A, Aoki K. (2024)

Quantification of Cyclin-CDK dissociation constants in living cells using fluorescence cross-correlation spectroscopy with green and near-infrared fluorescent proteins.

bioRxiv

doi: 10.1101/2024.11.14.623553